Google WMT has been recording a large amount of 404's. All of the pages work fine.
I ran Screaming Frog SEO Spider on a sample of 70,000 URL's. Of those URL's 67 had "Connection Timeout".
There were zero 404's.
Is the server perhaps giving out a 408 or similar and Google is grouping them together with 404's? I've noticed that WMT appears to be grouping 410 with 404's too.
Cheers :)