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When I ran your keyword density analyzer on my new site, I noticed that it only picked up a portion of the words on the page. Do you know why it would do this?
There is a comprehensive "stop word" [searchengineworld.com] list and the option to filter out words of a certain length, you can however turn the features off.
The words are keywords that are not listed in the stop-word list, so I don't know why they aren't being indexed.
I used this tool: [searchengineworld.com...] and I simply typed in my URL address and hit return to view the results.
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