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If you have more than one variable, perhaps you could consider using mod_rewrite if you can. From a site usability basis, using mod_rewrite anyway could also be an idea.
A site search for mod rewrite will give you some useful information to look into.
Some of my pages have a looong url with 4-5 variables in it and it works out good. I also have 1st position for a highly competitive KW in Google, the page in in PHP with more than 4 variables in it.
Google also is trying to improve on handling long URLs with multiple variables in it. lets hope for the good.
Cheers
Whilst if all the pages can be followed by the bots then the internal link structure of the site can be established correctly.
I think you'll find a better rank site in the SERPS with a proper internal link structure that can be fully indexed.
I had one suggestion that I create an html file with just one frame in it and it loads the weird url.
This is not too diffucult since we don't have a ton of pages.