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If your looking to do an entire site, but you have mutliple ones you want to track, click on REPORTS tab, go to Reporting URLS.
Enter in the various URL's (can be the root domains, individual pages, its up to you how specific the information is that you want to track).
Mark them all as active.
Now wait for a day or so for your reports to be generated.
TO VIEW your stats:
Reports tab-> Performance Report
Click the circle by "Reporting URL" Select the URL by which you want to track specifically (domain whatever)
This help you?