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ex. This is the domain: http://www.example.com
This is the sub domain: http://southafrica.example.com.
I'm not too sure I even explained this right, but I'm hoping you guys are so brilliant, you'll get what I'm trying to say.
[edited by: encyclo at 1:02 am (utc) on July 30, 2008]
[edit reason] switched to example.com [/edit]
Google Webmaster Tools shows all links from the sub domain pages as being internal links within the main site. So it would seem that sub domains are no longer considered to be a separate site with external links.