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Though the link: command may not highlight any of the latter instances, you can also look for your "missing" page in google, by typing its address and picking each of the options it offers you...
But no, I don't think it will affect your ranking - boosts come when it finds something it likes, not when it can't find something it may or may not like...
DerekH
Of course, this assumes a bug-free Google is operating.
Kaled.
It has been suggested in other threads that this sort of thing can happen if someone enters garbage while using the Google toolbar.
There are many explanations why a site might drop significantly.
1: It didn't deserve the high ranking and was there temporarily as a freak search result.
2: Lost backlinks (possibly temporary as a result of a server failure).
3: Backlinks being demoted. If you have backlinks from dodgy sites the Google techs may have caught up.
4: A minor algo tweak can have large effects in competitive areas. This is especially true if your site has a relatively low PR and achieved it position by factors such as H1 keywords, anchor text, etc.
5: New sites may be pushed up by Google temporarily. In the days of the dance, Everflux could cause new sites to oscillate for up to three months.
And those are just a few reasons from a really long list. Remember, checking backlinks with Google highly unreliable.
Probably the best way to check backlinks with Google is to search for www.domainname.com -site:domainname.com. This is imperfect but is vastly better than the official method.
Kaled.
I tried the www.domainname.com -site:domainname.com. The number of links returned is significanlty lower than my other sites. I am hoping it is a temporay glitch....
All thoughts on this subject are appreciated.