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The are running Free BSD as the main Kernel, so anything you can run on Free BSD can be run on the MAC server. Including mySQL and PhP.
It's a much better situation for Apple than relying on the proprietary OS.
I'm still not convinced it will do everything I need it to, but I'm still considering it. Apple products are by far more stable than anything else on the market, and if the software I need can be run, I think it's a viable alternative.