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We have seen a huge drop in the pagerank and we understand that google as to accept and integrate the changes.
Will all the pr be conserved and transfered to the new links?
How long could it take to see the PR changes? 1 or 2 pr updates or even more?
Also does the PR will be transferred from subdomains links (domain.site.com to regular www/dir/ form?
Your PR will all be consolidated into one version of your domain name, eventually.
Since you have already implemented the change, it will probably be thoroughly spidered before the next Google update. I would expect part (possibly most) of the PR to be transferred with that update, and all of it to be transferred by the update that follows.
Reminder: Updates occur quarterly now, and they're typically followed by a PR update about a week later, so it could take as long as six months for everything to be fully resolved.
Also does the PR will be transferred from subdomains links (domain.site.com to regular www/dir/ form?I'm uncertain exactly what your asking here but if your redirect also redirects your subdomains, then PR associated with those subdomains will also be transferred.
relating to the second question I asked ( about the subdomains) you guessed right, and you answered the question already, thanks again ;)
We did those changes after a huge drop in rankings anyway (trying to fix the problem and structure was a problem among others...)
So I'll sit and wait then!