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I imagine for someone like you, per transaction costs are not as important as the processing rate.
Actually, back in 2000 i quit using paypal as a payment processor on another project and the problems i had then were so severe and so persistent and unresolvable that i would not tell them for fear of sounding crazy.
That was way before ebay bought them and i use them frequently to pay for items and to pay affiliates without trouble. I had hoped they were better.
And they probably are better, but still may not be up to snuff :)