I was banned and then reinstated after discussing the situation with adsense. I took a very similar approach as you, offering my log files and politely explaining the specifics of my situation and my respect for the system (i am also an adwords advertiser).
The entire process, for me, took about 3 weeks.
I did get all funds that I had earned previous to the banning. Of course, there was no compinsation for my "down time".
I found the team to be entirely reasonable and open to deal with. Perhaps a bit slow, but everybody seems slow when you are talking about your own money :)
Good luck, and my guess is that if all the facts you have stated are the only issues in effect, you will be fine.