JustAnother - 6:57 pm on Jul 16, 2012 (gmt 0)
I did use Filezilla up until a few weeks ago, but just took a wild guess at some point that if the file uploaded is different than the original on my computer, it could be the FTP software that is rewriting it right before uploading it, so I uninstalled Filezilla and now use Coffee cup.
Coffee cup doens't seem to upload all the pictures correctly unfortunately, but the text files are uploaded right. Haven't had problems of files uploaded being different than the originals as far as I can make out. Hopefully it won't start later.